ElasticSearchController.java
/*
* Copyright 2022 Global Crop Diversity Trust
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.genesys.server.api.admin.v1;
import java.io.IOException;
import java.lang.reflect.ParameterizedType;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.concurrent.BlockingQueue;
import java.util.concurrent.locks.Lock;
import javax.annotation.Resource;
import org.elasticsearch.action.admin.cluster.health.ClusterHealthRequest;
import org.elasticsearch.action.admin.cluster.health.ClusterHealthResponse;
import org.elasticsearch.client.RequestOptions;
import org.elasticsearch.client.RestHighLevelClient;
import org.elasticsearch.client.indices.GetIndexRequest;
import org.elasticsearch.client.indices.GetIndexResponse;
import org.elasticsearch.cluster.metadata.AliasMetaData;
import org.genesys.blocks.model.EmptyModel;
import org.genesys.blocks.model.filters.EmptyModelFilter;
import org.genesys.server.api.ApiBaseController;
import org.genesys.server.component.elastic.ElasticReindex;
import org.genesys.server.exception.InvalidApiUsageException;
import org.genesys.server.model.genesys.Accession;
import org.genesys.server.service.ElasticsearchService;
import org.genesys.server.service.filter.AccessionFilter;
import org.genesys.spring.config.HazelcastConfig;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.beans.factory.annotation.Qualifier;
import org.springframework.core.task.TaskExecutor;
import org.springframework.http.MediaType;
import org.springframework.security.access.prepost.PreAuthorize;
import org.springframework.web.bind.annotation.GetMapping;
import org.springframework.web.bind.annotation.PathVariable;
import org.springframework.web.bind.annotation.PostMapping;
import org.springframework.web.bind.annotation.RequestBody;
import org.springframework.web.bind.annotation.RequestMapping;
import org.springframework.web.bind.annotation.RequestParam;
import org.springframework.web.bind.annotation.RestController;
import com.fasterxml.jackson.databind.ObjectMapper;
import com.fasterxml.jackson.datatype.jsr310.JavaTimeModule;
@RestController("elasticSearchApi1")
@RequestMapping(ElasticSearchController.CONTROLLER_URL)
@PreAuthorize("hasRole('ADMINISTRATOR')")
public class ElasticSearchController {
/** The Constant CONTROLLER_URL. */
public static final String CONTROLLER_URL = ApiBaseController.APIv1_BASE + "/admin/elastic";
public static final Logger LOG = LoggerFactory.getLogger(ElasticSearchController.class);
@Autowired(required = false)
private ElasticsearchService elasticsearchService;
@Autowired
private TaskExecutor taskExecutor;
@Autowired(required = false)
private RestHighLevelClient client;
@Resource
private BlockingQueue<ElasticReindex> elasticReindexQueue;
@Resource
private Lock elasticsearchReindexLock;
@Resource
@Qualifier("clusterFlags")
private Map<String, Boolean> clusterFlags;
@GetMapping(value = "", produces = { MediaType.APPLICATION_JSON_VALUE })
public IndexResponse getIndexResponse() throws IOException {
IndexResponse indexResponse = new IndexResponse();
indexResponse.clusterStopReindexAll = Boolean.TRUE.equals(clusterFlags.get(HazelcastConfig.ClusterFlags.STOP_REINDEX_ALL.value));
indexResponse.clusterStopReindex = Boolean.TRUE.equals(clusterFlags.get(HazelcastConfig.ClusterFlags.STOP_REINDEX.value));
if (client.indices().exists(new GetIndexRequest("*"), RequestOptions.DEFAULT)) {
GetIndexResponse getIndexResponse = client.indices().get(new GetIndexRequest("*"), RequestOptions.DEFAULT);
indexResponse.indexes = getIndexResponse.getAliases();
indexResponse.reindexTypes = createReindexTypesMap();
indexResponse.updateQueueSize = elasticReindexQueue.size();
}
return indexResponse;
}
@PostMapping(value = "/action/reindex/accn")
public void reindexElasticFiltered(@RequestBody AccessionFilter accessionFilter) throws IOException {
if (!assertReindex()) {
throw new RuntimeException("Reindex queue not empty or operation is locked! Unable to run new indexing.");
}
taskExecutor.execute(() -> {
try {
elasticsearchService.reindex(Accession.class, accessionFilter);
} catch (Throwable e) {
LOG.error("Error excecuting reindex Accession", e);
}
});
}
@PostMapping(value = "/action/remove/filtered")
public void removeElasticFiltered(@RequestParam(value = "type") String type, @RequestBody String jsonFilter) throws Exception {
if (!assertReindex()) {
throw new RuntimeException("Reindex queue not empty or operation is locked! Unable to run new indexing.");
}
var filterType = Class.forName(type);
if (!(EmptyModelFilter.class.isAssignableFrom(filterType))) {
throw new InvalidApiUsageException("type is not an EmptyModelFilter");
}
var targetClass = ((ParameterizedType) filterType.getGenericSuperclass()).getActualTypeArguments()[1];
@SuppressWarnings("unchecked")
Class<EmptyModel> modelClass = (Class<EmptyModel>) targetClass;
@SuppressWarnings("unchecked")
Class<EmptyModelFilter<?, EmptyModel>> modelFilterClass = (Class<EmptyModelFilter<?, EmptyModel>>) filterType;
var filter = new ObjectMapper().registerModule(new JavaTimeModule()).readValue(jsonFilter, modelFilterClass);
removeElasticFiltered(modelClass, filter);
}
@PostMapping(value = "/action/remove/accn")
public void removeElasticFiltered(@RequestBody AccessionFilter filter) {
removeElasticFiltered(Accession.class, filter);
}
private <E extends EmptyModel> void removeElasticFiltered(Class<E> modelClass, EmptyModelFilter<?, E> filter) {
LOG.warn("Removing from {} for filter: {}", modelClass, filter);
taskExecutor.execute(() -> {
try {
elasticsearchService.remove(modelClass, filter);
} catch (Throwable e) {
LOG.error("Error executing reindex of " + modelClass, e);
}
});
}
@PostMapping(value = "/action/reindex")
public void reindexElasticContent(@RequestParam(value = "type", required = true) String type) throws IOException {
if (!assertReindex()) {
throw new RuntimeException("Reindex queue not empty or operation is locked! Unable to run new indexing.");
}
if (type.equals("All")) {
taskExecutor.execute(() -> {
try {
elasticsearchService.reindexAll();
} catch (Throwable e) {
LOG.error("Error excecuting reindexAll", e);
}
});
} else {
taskExecutor.execute(() -> {
try {
elasticsearchService.reindex(Class.forName(type));
} catch (Throwable e) {
LOG.error("Error excecuting reindex of " + type, e);
}
});
}
}
@PostMapping(value = "/action/stop-reindex")
public void stopReindex() {
elasticsearchService.stopReindex();
}
@PostMapping(value = "/action/stop-reindex-all")
public void stopReindexAll() {
elasticsearchService.stopReindexAll();
}
@PostMapping(value = "/action/allow-reindex-all")
public void allowReindexAll() {
elasticsearchService.allowReindexAll();
}
@PostMapping(value = "/action/realias")
public void moveAlias(@RequestParam(name = "aliasName") String aliasName, @RequestParam(name = "indexName") String indexName) {
elasticsearchService.realias(aliasName, indexName);
}
@PostMapping(value = "/action/add-alias")
public void addAlias(@RequestParam(name = "aliasName") String aliasName, @RequestParam(name = "indexName") String indexName) {
elasticsearchService.addAlias(aliasName, indexName);
}
@PostMapping(value = "/action/delete-alias")
public void deleteAlias(@RequestParam(name = "aliasName") String aliasName) {
elasticsearchService.deleteAlias(aliasName);
}
@PostMapping(value = "/action/delete-index/{indexName}")
public void deleteIndex(@PathVariable(name = "indexName") String indexName) {
elasticsearchService.deleteIndex(indexName);
}
@GetMapping(value = "/cluster/status", produces = { MediaType.APPLICATION_JSON_VALUE })
public ClusterHealthResponse getClusterHealthStatus() throws IOException {
var clusterHealthResponse = client.cluster().health(new ClusterHealthRequest(), RequestOptions.DEFAULT);
return clusterHealthResponse;
}
public static class IndexResponse {
public Map<String, List<AliasMetaData>> indexes;
public Map<String, String> reindexTypes;
public int updateQueueSize;
public Boolean clusterStopReindexAll;
public Boolean clusterStopReindex;
}
private Map<String, String> createReindexTypesMap() {
Map<String, String> reindexTypesMap = new HashMap<>();
for (Class<?> clazz : elasticsearchService.getIndexedEntities()) {
reindexTypesMap.put(clazz.getSimpleName(), clazz.getName());
}
return reindexTypesMap;
}
private boolean assertReindex() {
try {
boolean isLockAcquired = elasticsearchReindexLock.tryLock();
if (!isLockAcquired || elasticReindexQueue.size() > 0) {
return false;
}
} finally {
elasticsearchReindexLock.unlock();
}
return true;
}
}