GenesysImageGalleryAspects.java
/*
* Copyright 2019 Global Crop Diversity Trust
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
* http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*/
package org.genesys.server.component.aspect;
import java.util.regex.Matcher;
import org.aspectj.lang.annotation.Aspect;
import org.genesys.filerepository.InvalidRepositoryPathException;
import org.genesys.filerepository.model.ImageGallery;
import org.genesys.filerepository.model.RepositoryFolder;
import org.genesys.filerepository.model.RepositoryImage;
import org.genesys.filerepository.service.ImageGalleryService;
import org.genesys.filerepository.service.aspect.AbstractImageGalleryAspects;
import org.genesys.filerepository.service.aspect.ImageGalleryAspectsImpl;
import org.genesys.server.model.genesys.Accession;
import org.genesys.server.model.genesys.AccessionId;
import org.genesys.server.persistence.AccessionIdRepository;
import org.genesys.server.service.AccessionService;
import org.genesys.server.service.InstituteFilesService;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import org.springframework.beans.factory.InitializingBean;
import org.springframework.beans.factory.annotation.Autowired;
import org.springframework.dao.DataIntegrityViolationException;
/**
* The Class GenesysImageGalleryAspects.
*/
@Aspect
public class GenesysImageGalleryAspects extends AbstractImageGalleryAspects implements InitializingBean {
/** The Constant LOG. */
public static final Logger LOG = LoggerFactory.getLogger(GenesysImageGalleryAspects.class);
/** The image gallery aspect. */
private ImageGalleryAspectsImpl imageGalleryAspect = new ImageGalleryAspectsImpl();
/** The institute files service. */
@Autowired
private InstituteFilesService instituteFilesService;
/** The image gallery service. */
@Autowired
private ImageGalleryService imageGalleryService;
@Autowired
private AccessionService accessionService;
@Autowired
private AccessionIdRepository accessionIdRepository;
/**
* Instantiates a new genesys image gallery aspects.
*/
public GenesysImageGalleryAspects() {
LOG.warn("Instantiating {}", getClass().getName());
}
/* (non-Javadoc)
* @see org.springframework.beans.factory.InitializingBean#afterPropertiesSet()
*/
@Override
public void afterPropertiesSet() throws Exception {
LOG.warn("Instantiating bean {}", getClass().getName());
imageGalleryAspect.setImageGalleryService(imageGalleryService);
}
/* (non-Javadoc)
* @see org.genesys.filerepository.service.aspect.AbstractImageGalleryAspects#addImageToGallery(org.genesys.filerepository.model.RepositoryImage)
*/
@Override
protected void addImageToGallery(RepositoryImage repositoryImage) throws InvalidRepositoryPathException {
imageGalleryAspect.addImageToGallery(repositoryImage);
RepositoryFolder folder = repositoryImage.getFolder();
if (isAccessionFolder(folder)) {
Accession accession = accessionService.findMatchingAccession(folder);
if (accession != null) {
ensureImageGallery(accession, repositoryImage);
updateImageCountOfAcce(accession);
} else {
LOG.warn("No accession for repository folder {}", folder.getPath());
throw new DataIntegrityViolationException("No unique accession in Genesys for " + folder.getPath());
}
}
}
/* (non-Javadoc)
* @see org.genesys.filerepository.service.aspect.AbstractImageGalleryAspects#removeImageFromGallery(org.genesys.filerepository.model.RepositoryImage)
*/
@Override
protected void removeImageFromGallery(RepositoryImage repositoryImage) throws InvalidRepositoryPathException {
imageGalleryAspect.removeImageFromGallery(repositoryImage);
RepositoryFolder repositoryFolder = repositoryImage.getFolder();
if (isAccessionFolder(repositoryFolder)) {
Accession accession = accessionService.findMatchingAccession(repositoryFolder);
if (accession != null) {
updateImageCountOfAcce(accession);
}
}
}
/**
* Ensures that an {@link ImageGallery} exists for accession images.
*
* @param repositoryImage the repository image
*/
private void ensureImageGallery(Accession accession, RepositoryImage repositoryImage) {
try {
if (accession != null) {
AccessionId accessionId = accession.getAccessionId();
if (accessionId.getRepositoryFolder() == null // New gallery
// or image gallery doesn't exist
|| imageGalleryService.loadImageGallery(accessionId.getRepositoryFolder().getFolderPath()) == null) {
ImageGallery imageGallery = instituteFilesService.createImageGallery(accession.getInstitute(), accession);
if (accessionId.getRepositoryFolder() == null) {
accessionIdRepository.updateRepositoryFolder(accessionId, imageGallery.getFolder());
}
}
}
} catch (InvalidRepositoryPathException e) {
LOG.warn("Error creating accession image gallery at {}, error is {}", repositoryImage.getFolder().getPath(), e.getMessage());
}
}
public final static boolean isAccessionFolder(RepositoryFolder folder) {
Matcher matcher = AccessionService.ACCESSION_IMAGE_PATTERN.matcher(folder.getPath());
if (matcher.matches()) {
LOG.debug("Path {} is within institute accession files prefix instCode={} acceNumb={}", folder.getPath(), matcher.group(1), matcher.group(2));
return true;
} else {
return false;
}
}
public final static boolean isInstituteFolder(RepositoryFolder folder) {
Matcher matcher = AccessionService.INSTITUTE_FOLDER_PATTERN.matcher(folder.getPath());
if (matcher.matches()) {
LOG.debug("Path {} is an institute folder instCode={}", folder.getPath(), matcher.group(1));
return true;
} else {
return false;
}
}
private void updateImageCountOfAcce(Accession accession) {
AccessionId accessionId = accession.getAccessionId();
try {
ImageGallery imageGallery = instituteFilesService.loadImageGallery(accession.getInstitute(), accession);
if (imageGallery != null) {
accessionIdRepository.updateImageCount(accessionId, imageGallery.getImages().size());
} else {
accessionIdRepository.updateImageCount(accessionId, 0);
}
} catch (InvalidRepositoryPathException e) {
LOG.warn("Error updating imageCount of accession, error is {}", e.getMessage());
}
}
}